Information for 10-CTCVGGVDAATGAACT (Motif 13)

A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T
Reverse Opposite:
C G T A C T A G A G C T A C G T G A T C C G T A A C G T A C G T G A C T A T C G A G T C G T A C A C T G A T C G C G T A A T C G
p-value:1e-10
log p-value:-2.384e+01
Information Content per bp:1.732
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.3 +/- 26.5bp
Average Position of motif in Background73.6 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTCVGGVDAATGAACT
--NAGGTCANTGACCT
 A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T
A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCVGGVDAATGAACT---
--GACGATAATGAGCTTGC
 A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTCVGGVDAATGAACT
------NTAATGAGCT
 A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTCVGGVDAATGAACT
--WATGCAAATGAG--
 A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTCVGGVDAATGAACT
-TGGAGGTAATTAAC-
 A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T
A C G T C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTCVGGVDAATGAACT---
---AAGGTAATTAGCTCAT
 A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CTCVGGVDAATGAACT--
------SSAATCCACANN
 A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PH0045.1_Hoxa1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CTCVGGVDAATGAACT---
---ACGGTAATTAGCTCAG
 A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G

Hoxb5/MA0904.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTCVGGVDAATGAACT---
---ACGGTAATTAGCTCAT
 A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T

PH0060.1_Hoxb5/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTCVGGVDAATGAACT---
---ACGGTAATTAGCTCAT
 A T G C A C G T A T G C T G A C A C T G A C T G T A G C C T G A C G T A G T C A C G A T C T A G G T C A C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T