Information for 8-TGCGTWGMACTGA (Motif 12)

A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A
Reverse Opposite:
A C G T A T G C C G T A A C T G A C G T A C T G A G T C G C T A C G T A G T A C C T A G A G T C G T C A
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.785
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.0 +/- 18.9bp
Average Position of motif in Background53.8 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCGTWGMACTGA
-CCTTTGATGT--
 A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGCGTWGMACTGA
TATCATTAGAACGCT
 A C G T A C G T A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGCGTWGMACTGA
-CCTTTGAWGT--
 A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGCGTWGMACTGA---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGCGTWGMACTGA------
--AATCGCACTGCATTCCG
 A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TGCGTWGMACTGA
ATTTGCATAACAATG-
 A C G T A C G T A C G T A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TGCGTWGMACTGA-
----AAGCACTTAA
 A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGCGTWGMACTGA-
----MRSCACTYAA
 A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TGCGTWGMACTGA-
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGCGTWGMACTGA
TNCCTTTGATCTTN
 A C G T A C G T A C T G A G T C C A T G A C G T C G A T C T A G G T A C G T C A A G T C A C G T A T C G T C G A
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T