Information for 12-GKRCTTGCYKTCA (Motif 21)

A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A T G A C C T A G A T C G A G T C C G T A C G T A A C T G A G T C G T A C A G T C
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.8 +/- 16.8bp
Average Position of motif in Background68.2 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GKRCTTGCYKTCA
NNACTTGCCTT--
 A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GKRCTTGCYKTCA-
------GCTGTCAA
 A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

CREB1/MA0018.2/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GKRCTTGCYKTCA
-----TGACGTCA
 A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GKRCTTGCYKTCA--
-----TGACGTCATC
 A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GKRCTTGCYKTCA---
----ATGACGTCAYYN
 A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GKRCTTGCYKTCA---
----RTGACGTCAYCN
 A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GKRCTTGCYKTCA-
------CCTGTCAA
 A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GKRCTTGCYKTCA----
-AACTAGCTGTCAATAC
 A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GKRCTTGCYKTCA-----
-NNNCAGCTGTCAATATN
 A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GKRCTTGCYKTCA---
----ATGACGTCATCN
 A C T G A C T G C T A G A G T C A C G T A C G T A C T G A T G C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A