Information for 5-GCAGCAAAGA (Motif 6)

A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A
Reverse Opposite:
A G C T G T A C C G A T A C G T A C G T C T A G A T G C A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.910
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif107.1
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets56.2 +/- 28.6bp
Average Position of motif in Background46.9 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCAGCAAAGA
GGAACAAAGR
 A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCAAAGA----
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCAAAGA
NACAGGAAAT-
 A C G T A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAGCAAAGA--
ACATCAAAGGNA
 A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A A C G T A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCAGCAAAGA--
AAAGATCAAAGGAA
 A C G T A C G T A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAGCAAAGA----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCAAAGA----
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCAGCAAAGA----
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCAGCAAAGA----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCAGCAAAGA
NACAGGAAAT-
 A C G T A C T G A G T C C G T A A T C G A G T C C G T A C G T A C G T A A C T G C T G A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T