Information for 5-CAGGGTCTGTGCAGAG (Motif 6)

A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C T G A T G C C G T A A T G C C T G A A C T G C G T A A G T C A G T C A G T C C G A T A C T G
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.853
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 22.9bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAGGGTCTGTGCAGAG-----
----NNNANTGCAGTGCNNTT
 A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGGGTCTGTGCAGAG---
--NNGTATGTGCACATNNN
 A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G A C G T A C G T A C G T
A C G T A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAGGGTCTGTGCAGAG---
--NTNTATGTGCACATNNN
 A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G A C G T A C G T A C G T
A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGTCTGTGCAGAG
ANCAGGATGT--------
 A C G T A C G T A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CAGGGTCTGTGCAGAG
GTCACGCTCNCTGA----
 A C G T A C G T A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGTCTGTGCAGAG---
YCAGGCWCAGTACCAGGCTC
 A C G T A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGTCTGTGCAGAG
NRRGGGTCTT-------
 A C G T A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CAGGGTCTGTGCAGAG-
-GGGCCGTGTGCAAAAA
 A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G A C G T
A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.46
Offset:2
Orientation:forward strand
Alignment:CAGGGTCTGTGCAGAG-
--GGCCYCCTGCTGDGH
 A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.46
Offset:10
Orientation:reverse strand
Alignment:CAGGGTCTGTGCAGAG----
----------CCAGACRSVB
 A G T C C G T A A C T G A C T G T A C G C G A T A G T C A G C T A T C G A C G T A T C G A G T C C G T A A C T G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C