Information for 3-GRTGTTTATTCGGGAT (Motif 4)

A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
Reverse Opposite:
C G T A A G C T G T A C G T A C A G T C A C T G G T C A C G T A A C G T C G T A C G T A C G T A A G T C C G T A G A C T A T G C
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.771
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 25.3bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXG1/MA0613.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GRTGTTTATTCGGGAT
-TTGTTTAC-------
 A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GRTGTTTATTCGGGAT
--TGTTTAC-------
 A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GRTGTTTATTCGGGAT
-TTGTTTAC-------
 A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GRTGTTTATTCGGGAT
--TGTTTATTT-----
 A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GRTGTTTATTCGGGAT
NVWTGTTTAC-------
 A C G T A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GRTGTTTATTCGGGAT
TATTGTTTATT------
 A C G T A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GRTGTTTATTCGGGAT
-NTGTTTAYATWW---
 A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GRTGTTTATTCGGGAT
--TGTTTAC-------
 A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GRTGTTTATTCGGGAT
--TGTTTAC-------
 A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXO4/MA0848.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GRTGTTTATTCGGGAT
--TGTTTAC-------
 A T C G C T A G C G A T A C T G A C G T A C G T C G A T C G T A C G A T A C G T A G T C T A C G A C T G A C T G C T G A A C G T
A C G T A C G T C G A T C T A G G A C T C A G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T