Information for 1-AVBHGCTTGCAAA (Motif 2)

C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A
Reverse Opposite:
A C G T A G C T A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A T A C G A C T G A C G T
p-value:1e-12
log p-value:-2.850e+01
Information Content per bp:1.793
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif5.50%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.8 +/- 28.0bp
Average Position of motif in Background44.7 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AVBHGCTTGCAAA-----
---CAATTGCAAAAATAT
 C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AVBHGCTTGCAAA
--TTGCGTGCVA-
 C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AVBHGCTTGCAAA---
------TTGCAACATN
 C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AVBHGCTTGCAAA
---TGCGTG----
 C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AVBHGCTTGCAAA
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AVBHGCTTGCAAA--
GGGCCGTGTGCAAAAA
 A C G T C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AVBHGCTTGCAAA----
----ATATGCAAATNNN
 C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AVBHGCTTGCAAA
NNACTTGCCTT----
 A C G T A C G T C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AVBHGCTTGCAAA---
-----ATTGCACAATA
 C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AVBHGCTTGCAAA--
AACTAGCTGTCAATAC
 A C G T C G T A T A G C A G T C G A C T A C T G A G T C A G C T A C G T A C T G A G T C C G T A C T G A G T C A A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C