Information for 5-ACAAAGCTAA (Motif 13)

G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G A T G C A C G T A C G T A C G T A C T G A C G T
p-value:1e-6
log p-value:-1.516e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.59%
Number of Background Sequences with motif59.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets43.8 +/- 24.6bp
Average Position of motif in Background50.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACAAAGCTAA
ACAAAG----
 G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCTAA
VRRACAAWGG---
 A C G T A C G T A C G T G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCTAA
GGAACAAAGR---
 A C G T A C G T A C G T G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACAAAGCTAA--------
-CAAAGCTAATTAGNTTN
 G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCTAA
AAAACAAAGG---
 A C G T A C G T A C G T G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGCTAA
RACAAWGG---
 A C G T G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCTAA
RNAACAATGG---
 A C G T A C G T A C G T G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACAAAGCTAA
---AAGCTTG
 G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCTAA
AAAACAATGG---
 A C G T A C G T A C G T G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGCTAA
AACAAAGG---
 A C G T G T C A A G T C G T C A C G T A C G T A A T C G A G T C A C G T C G T A C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T