Information for 3-CTSTGTTCTCTGGKTG (Motif 3)

A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
Reverse Opposite:
A G T C C T G A G T A C A G T C G T A C C T G A A T C G C G T A A C T G C G T A C G T A A G T C C G T A A T G C C G T A A C T G
p-value:1e-15
log p-value:-3.471e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.1 +/- 17.9bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTSTGTTCTCTGGKTG
YCTTTGTTCC-------
 A C G T A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTSTGTTCTCTGGKTG
TNNTCCTTTGTTCTNNT----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CTSTGTTCTCTGGKTG
NNNTCCTTTGTTCTNNN----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTSTGTTCTCTGGKTG
AACCCTTTGATCTTT-----
 A C G T A C G T A C G T A C G T A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTSTGTTCTCTGGKTG
CCTTTGATCTTT-----
 A C G T A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTSTGTTCTCTGGKTG
CCTTTGTTTT-------
 A C G T A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTSTGTTCTCTGGKTG
TNTTATCTTATCTT----
 A C G T A C G T A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CTSTGTTCTCTGGKTG
---YSTTATCT-----
 A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTSTGTTCTCTGGKTG
NNGCACCTTTCTCC-----
 A C G T A C G T A C G T A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CTSTGTTCTCTGGKTG
ANTCCTTTGTCTNNNN-
 A C G T A G T C A C G T T A C G G A C T T C A G A C G T A C G T A G T C A C G T A T G C A G C T A C T G C T A G A C T G A G C T A C T G
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T