Information for 13-GAGCAMAAASAMC (Motif 25)

C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C
Reverse Opposite:
A C T G C A G T C G A T T A C G A C G T A C G T C G A T A C G T A G C T T C A G A G T C A C G T A G T C
p-value:1e-8
log p-value:-1.853e+01
Information Content per bp:1.787
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets67.4 +/- 22.7bp
Average Position of motif in Background54.0 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GAGCAMAAASAMC
NNNVCTGWGYAAACASN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGCAMAAASAMC----
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGCAMAAASAMC-
AGAGTCCAAAGTCCA
 A C G T C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGCAMAAASAMC-
CANAGNNCAAAGTCCA
 A C G T A C G T C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGCAMAAASAMC--
AGAAGAACAAAGGACTA
 A C G T A C G T C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGCAMAAASAMC
WAAGTAAAYA----
 A C G T C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GAGCAMAAASAMC
CAAAAGTAAACAAAG-
 A C G T A C G T A C G T C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAGCAMAAASAMC
-GGAACAAAGR--
 C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAGCAMAAASAMC
AAGTAAACAAA--
 C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGCAMAAASAMC
AAAGTAAACA----
 A C G T C T A G C G T A C T A G A G T C C T G A G T C A C G T A G T C A G T C A A T G C C G T A G T C A A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T