Information for 13-AATATTGCGA (Motif 18)

C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A
Reverse Opposite:
A G C T G T A C T A C G T A G C T C G A T C G A C G A T T C G A G A C T G A C T
p-value:1e-1
log p-value:-2.772e+00
Information Content per bp:1.704
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background54.0 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--AATATTGCGA--
CTAATATTGCTAAA
 A C G T A C G T C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--AATATTGCGA--
CTAATATTGCTAAA
 A C G T A C G T C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

ZBED1/MA0749.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AATATTGCGA---
TATGTCGCGATAG
 C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A A C G T A C G T A C G T
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AATATTGCGA--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AATATTGCGA---
ANATTTTTGCAANTN
 A C G T A C G T C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

GFX(?)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AATATTGCGA--
ATTCTCGCGAGA
 C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A A C G T A C G T
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AATATTGCGA--
ANTTTTACGACC
 C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A A C G T A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

ZBTB33/MA0527.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AATATTGCGA---
NAGNTCTCGCGAGAN
 A C G T A C G T C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A A C G T A C G T A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AATATTGCGA-----
ANATTTTACGAGNNNN
 A C G T C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AATATTGCGA--
-NTTTTACGACC
 C T G A C T G A A C G T G C T A A G C T A G C T A T C G A T G C A C T G T C G A A C G T A C G T
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C