Information for 15-TGCTGCCCTGGAT (Motif 17)

A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C C T G A
p-value:1e-3
log p-value:-8.871e+00
Information Content per bp:1.928
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.6 +/- 24.8bp
Average Position of motif in Background82.8 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCCTGGAT
---TGCCCAGNHW
 A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCCTGGAT
---TGACCTTGAT
 A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCCTGGAT---
-GCTGACCTTGAACTN
 A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGCTGCCCTGGAT
--CTGCCCGCA--
 A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCCTGGAT
---TGACCTARTT
 A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCCTGGAT
---TGACCTTGAN
 A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCCTGGAT
---TGACCTTGAV
 A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGCTGCCCTGGAT
AAATTTGCTGACTTAGA-
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGCTGCCCTGGAT-----
---TACCCTAGTTACCGA
 A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGCTGCCCTGGAT-
NGTTGCCATGGCAA
 A G C T C T A G A G T C C G A T A C T G A G T C A G T C A G T C C G A T A C T G A C T G C G T A A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A