Information for 13-CAGCATGMTYKAG (Motif 13)

A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T G T A C C T A G C G T A A C T G A T G C C G T A A C G T A C T G A G T C A C G T A C T G
p-value:1e-7
log p-value:-1.768e+01
Information Content per bp:1.886
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.2 +/- 26.7bp
Average Position of motif in Background43.3 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CAGCATGMTYKAG
GAGCACAGCAGGACA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CAGCATGMTYKAG
DCTCAGCAGG------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAGCATGMTYKAG
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAGCATGMTYKAG
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGCATGMTYKAG--
TATCATAATTAAGGA
 A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGCATGMTYKAG
GTCAGCANNTN----
 A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGCATGMTYKAG
NGTCAGCANTTT----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAGCATGMTYKAG
HWWGTCAGCAWWTTT---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCATGMTYKAG
TGAGTCAGCA--------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------CAGCATGMTYKAG
GCTGAGTCAGCAATTTTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A T C G G T A C C G A T G A C T A C T G C G T A A C T G
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T A C G T A C G T