Information for 13-AGGAAAGTCS (Motif 18)

C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G
Reverse Opposite:
A T G C A C T G C G T A A G T C A G C T A G C T A C G T A G T C A G T C A G C T
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.891
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif31.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets46.7 +/- 22.8bp
Average Position of motif in Background45.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AGGAAAGTCS-
-GGAAATTCCC
 C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGGAAAGTCS-
-GGAAANCCCC
 C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGGAAAGTCS-
-GGAAATTCCC
 C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGAAAGTCS
AAGGCAAGTGT
 A C G T C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGAAAGTCS-
-GGAAATCCCC
 C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

TEAD3/MA0808.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGGAAAGTCS
TGGAATGT--
 C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGGAAAGTCS
NDCAGGAARTNN-
 A C G T A C G T A C G T C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGGAAAGTCS
AGAGGAA-----
 A C G T A C G T C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGAAAGTCS
CCWGGAATGY--
 A C G T A C G T C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGGAAAGTCS
NNTGGAAANN--
 A C G T A C G T C T G A A C T G A C T G C G T A C T G A C T G A A C T G A C G T A G T C A T C G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T