p-value: | 1e-11 |
log p-value: | -2.641e+01 |
Information Content per bp: | 1.772 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.79% |
Number of Background Sequences with motif | 0.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 47.2 +/- 21.7bp |
Average Position of motif in Background | 36.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
POL004.1_CCAAT-box/Jaspar
Match Rank: | 1 |
Score: | 0.73 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | BGTACCAGCCAAT-- ---ACTAGCCAATCA |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | BGTACCAGCCAAT ----BCAGACWA- |
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NFY(CCAAT)/Promoter/Homer
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | BGTACCAGCCAAT--- ------AGCCAATCGG |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | BGTACCAGCCAAT ------TGCCAA- |
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GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | BGTACCAGCCAAT -GGACCACCCACG |
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NFIX/MA0671.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | BGTACCAGCCAAT ----CGTGCCAAG |
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PB0167.1_Sox13_2/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --BGTACCAGCCAAT-- ANNTNCCCACCCANNAC |
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NFYB/MA0502.1/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | BGTACCAGCCAAT--- -AAATGGACCAATCAG |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | BGTACCAGCCAAT ----CCAGACAG- |
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PB0164.1_Smad3_2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -BGTACCAGCCAAT--- TACGCCCCGCCACTCTG |
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