Information for 5-GRRTCCATSCAATAAT (Motif 7)

T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T
Reverse Opposite:
T C G A G C A T C G A T G T C A A G C T C A G T A C T G T A C G G C T A C G A T C T A G C T A G C T G A G A T C A G C T A T G C
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.622
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.8 +/- 28.3bp
Average Position of motif in Background52.7 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF410/MA0752.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GRRTCCATSCAATAAT----
---TCCATCCCATAATACTC
 T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GRRTCCATSCAATAAT-
NNNTCCATCCCATAANN
 T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

PB0197.1_Zfp105_2/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GRRTCCATSCAATAAT----
---ATGGTTCAATAATTTTG
 T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.56
Offset:10
Orientation:forward strand
Alignment:GRRTCCATSCAATAAT-
----------AATAATT
 T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GRRTCCATSCAATAAT-
-AATCAATTCAATAATT
 T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T A C G T
A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GRRTCCATSCAATAAT
--------CCAATTAA
 T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GRRTCCATSCAATAAT--
--------CCAATAAAAC
 T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GRRTCCATSCAATAAT
---ACTAGCCAATCA-
 T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T
A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GRRTCCATSCAATAAT
--------CCAATTAG
 T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

HOXA5/MA0158.1/Jaspar

Match Rank:10
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GRRTCCATSCAATAAT-
---------CACTAATT
 T A C G T C G A C T A G G A C T A G T C A G T C C G T A C G A T A T G C A G T C G C T A T C G A C A G T C G T A C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T