Information for 3-GCAATYTTGGSMA (Motif 6)

A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A
Reverse Opposite:
A C G T A C G T A T G C G T A C T G A C C G T A C G T A C T G A G C T A G A C T A C G T A C T G A G T C
p-value:1e-11
log p-value:-2.709e+01
Information Content per bp:1.696
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif121.4
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets48.8 +/- 33.3bp
Average Position of motif in Background54.6 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCAATYTTGGSMA
CCTTGCAATTTTTNN--
A C G T A C G T A C G T A C G T A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCAATYTTGGSMA
GCNGCCATCTTG----
A C G T A C G T A C G T A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCAATYTTGGSMA--
NTNATGCAAYMNNHTGMAAY
A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A A C G T A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCAATYTTGGSMA
GCCGCCATCTTG----
A C G T A C G T A C G T A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCAATYTTGGSMA
NNTNNCAATATTAG---
A C G T A C G T A C G T A C G T A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCAATYTTGGSMA
NNTNNCAATATTAG---
A C G T A C G T A C G T A C G T A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAATYTTGGSMA
-CAAGCTT-----
A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCAATYTTGGSMA
AAGTCAGCANTTTTN----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAATYTTGGSMA--
-CAAATTCCGGAACC
A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A A C G T A C G T
A C G T G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GCAATYTTGGSMA
HWWGTCAGCAWWTTT-----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A C T G A C A G T G A C T C G A T C G A T A C T G C A T G A T C G G T C A G T C A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T A C G T A C G T