Information for 4-AACATGCACACTKGCC (Motif 5)

G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C
Reverse Opposite:
C A T G T A C G A T G C T G C A C G T A A C T G C G A T T A C G G A C T A C T G T G A C G C T A G A C T C A T G A C G T A C G T
p-value:1e-12
log p-value:-2.840e+01
Information Content per bp:1.687
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets60.5 +/- 17.6bp
Average Position of motif in Background47.1 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:AACATGCACACTKGCC--
-------NNACTTGCCTT
 G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AACATGCACACTKGCC
TAAAAATGCTGACTT---
 A C G T A C G T G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AACATGCACACTKGCC
NNTTTGCACACGGCCC
 G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AACATGCACACTKGCC-
-AGCGGCACACACGCAA
 G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AACATGCACACTKGCC
-------CCACTTGAA
 G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AACATGCACACTKGCC
---TTTCACACCT---
 G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C
A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AACATGCACACTKGCC
------ACCACTTGAA
 G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AACATGCACACTKGCC
---ATTAACACCT---
 G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C
A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AACATGCACACTKGCC
----TTCACACCTT--
 G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C
A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AACATGCACACTKGCC
---KTTCACACCT---
 G T C A T G C A G T A C C G T A C G A T A C T G G T A C C G T A A G T C C G T A A G T C A C G T A C G T A T C G A G T C G T A C
A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T