Information for 9-AACAGGCTGT (Motif 25)

T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T
Reverse Opposite:
C G T A A G T C C G T A A C T G T A G C A G T C C G A T C T A G C G A T A G C T
p-value:1e-8
log p-value:-2.003e+01
Information Content per bp:1.834
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif305.9
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets56.5 +/- 29.3bp
Average Position of motif in Background49.0 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AACAGGCTGT--
VAGRACAKNCTGTBC
 A C G T A C G T A C G T T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AACAGGCTGT---
NAGAACAGNCTGTNCT
 A C G T A C G T A C G T T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T A C G T A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AACAGGCTGT--
AAGAACATWHTGTTC
 A C G T A C G T A C G T T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AACAGGCTGT--
VAGRACAKWCTGTYC
 A C G T A C G T A C G T T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AACAGGCTGT----
AGNACANNNTGTNCTN
 A C G T A C G T T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T A C G T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACAGGCTGT
AACAGGAAGT
 T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.67
Offset:5
Orientation:forward strand
Alignment:AACAGGCTGT-
-----GCTGTG
 T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AACAGGCTGT
--TWGTCTGV
 T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AACAGGCTGT
ANCAGGATGT
 T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

SPDEF/MA0686.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AACAGGCTGT-
ACCCGGATGTA
 T C G A C G T A G A T C C G T A A C T G A T C G G T A C A C G T A C T G G C A T A C G T
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A