Information for 9-GTTATTTGAGATC (Motif 20)

A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C
Reverse Opposite:
A T C G C T G A A G C T A G T C A G C T G T A C C G T A C T G A C T G A C G A T C G T A T G C A G T A C
p-value:1e-9
log p-value:-2.144e+01
Information Content per bp:1.676
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif109.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets40.0 +/- 24.6bp
Average Position of motif in Background48.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTTATTTGAGATC
--AATTAGTG---
 A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C
A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTTATTTGAGATC
KCTATTTTTRGH-
 A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTTATTTGAGATC-
----TTTGAAACCG
 A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTATTTGAGATC
--NTTTTACGAC-
 A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C
A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTATTTGAGATC
--NTTTTACGACT
 A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C
A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTTATTTGAGATC-
NNTTTTTCTTATNT
 A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTATTTGAGATC
--NTTTTACGACC
 A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C
A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTTATTTGAGATC
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PH0067.1_Hoxc12/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTTATTTGAGATC---
GNNNTTTTACGACCTNA
 A C G T A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTTATTTGAGATC
GCTATTTTTGGM-
 A C T G A C G T G C A T G C T A A G C T A G C T C G A T A C T G C T G A A C T G C T G A A G C T T A G C
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T