Information for 4-TGTTAGCACA (Motif 19)

A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T A C T G G T A C G A C T T C G A G T C A G T A C G T C A
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.848
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif119.6
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets55.0 +/- 23.1bp
Average Position of motif in Background48.0 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAGCACA-----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTTAGCACA--
-GTCAGCANNTN
 A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A A C G T A C G T
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGTTAGCACA---
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAGCACA
SCTGTCARCACC
 A C G T A C G T A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTTAGCACA----
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTTAGCACA--
--TTMACACCTT
 A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A A C G T A C G T
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTTAGCACA
NNTTGGCANN
 A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0109.1_Bbx_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGTTAGCACA---
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTTAGCACA
GGTTGGCAT-
 A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTTAGCACA---
TTATTAGTACATAN
 A C G T A C G T A C T G A C G T A G C T C T G A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A