Information for 4-AGCAGCATAAACAAGT (Motif 4)

C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T
Reverse Opposite:
C T G A G T A C C G A T A C G T C A T G G A C T G A C T C G A T G T C A G C A T A C T G A G T C C G A T A C T G G A T C A G C T
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.683
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif103.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets51.3 +/- 25.1bp
Average Position of motif in Background50.6 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCAGCATAAACAAGT
ANCAGCTG--------
 C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCAGCATAAACAAGT
-CAAACGTAAACAAT-
 C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T
A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T A C G T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGCAGCATAAACAAGT
GTCAGCANNTN-----
 C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:AGCAGCATAAACAAGT
------GTAAACAAT-
 C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGCAGCATAAACAAGT
------GTAAACAA--
 C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGCAGCATAAACAAGT-----
------ATAAACAATTAAACA
 C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGCAGCATAAACAAGT
NNAGCAGCTGCT------
 A C G T A C G T C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGCAGCATAAACAAGT
AGCAGCTGCT------
 C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGCAGCATAAACAAGT
AACAGCTGAT------
 C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGCAGCATAAACAAGT
AACAGCTG--------
 C T G A C T A G G T A C C G T A C T A G G T A C C G T A C A G T G C T A C T G A C G T A G T A C G T C A C G T A C A T G A G C T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T