Information for 1-CAATCGGCTT (Motif 9)

G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T
Reverse Opposite:
T C G A C G T A A C T G A G T C A G T C A C T G C G T A A C G T A C G T C A T G
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.858
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.9 +/- 23.6bp
Average Position of motif in Background54.5 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAATCGGCTT
AGCCAATCGG---
 A C G T A C G T A C G T G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CAATCGGCTT---
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------CAATCGGCTT
AAATGGACCAATCAG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CAATCGGCTT-
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAATCGGCTT--
CNATAATCCGNTTNT
 A C G T A C G T A C G T G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAATCGGCTT-
GTAATCDGATTA
 A C G T G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T A C G T
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAATCGGCTT
GAACAATGG----
 A C G T A C G T A C G T G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CAATCGGCTT
GAAGATCAATCACTAA
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAATCGGCTT
CCAATCAA---
 A C G T G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAATCGGCTT
CTAATCCTCTT
 A C G T G A T C C G T A C G T A A C G T T G A C C T A G A C T G A G T C C G A T A C G T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T