Information for 6-TAAMATGTTTAATAGT (Motif 6)

A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T
Reverse Opposite:
G C T A A G T C A C G T C G T A A C G T A C G T C G T A C G T A C G T A T G A C G C T A C G A T A C T G A C G T A C G T C G T A
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.800
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.3 +/- 21.1bp
Average Position of motif in Background52.8 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TAAMATGTTTAATAGT
-------TTTAAT---
 A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TAAMATGTTTAATAGT-
-------TTTAATTGCN
 A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TAAMATGTTTAATAGT---
---ANATTTTACGAGNNNN
 A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TAAMATGTTTAATAGT---
---NAATTTTACGAGNTNN
 A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TAAMATGTTTAATAGT
----NTAATTAATAT-
 A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TAAMATGTTTAATAGT
----ATGTTTAC----
 A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T
A C G T A C G T A C G T A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TAAMATGTTTAATAGT
-----TTTTTATTGG-
 A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TAAMATGTTTAATAGT
-----NTTTTACGAGN
 A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

Hoxd8/MA0910.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAAMATGTTTAATAGT--
-TAAATAATTAATGGCTA
 A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T A C G T A C G T
A C G T C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAAMATGTTTAATAGT--
-TAAATAATTAATGGCTA
 A C G T C G T A G T C A G T A C C G T A C G A T A C T G C G A T A C G T A C G T C G T A G T C A C G A T C G T A A C T G C A G T A C G T A C G T
A C G T C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A