Information for 9-AWTTCACYAWCCW (Motif 8)

C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A
Reverse Opposite:
C G A T C T A G A C T G C G A T A C G T C T A G A C T G A C G T A C T G C G T A C G T A C G A T A G C T
p-value:1e-11
log p-value:-2.618e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 28.5bp
Average Position of motif in Background10.4 +/- 0.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AWTTCACYAWCCW
ATTGCACAATA--
 C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AWTTCACYAWCCW
AAATTAATTAATC-
 A C G T C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AWTTCACYAWCCW
SSAATCCACANN---
 A C G T A C G T C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AWTTCACYAWCCW
ACTTTCACTTTC--
 A C G T C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AWTTCACYAWCCW
AATCAATTCAATAATT-
 A C G T A C G T A C G T A C G T C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AWTTCACYAWCCW
GTTTTGCTTTCACTTTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AWTTCACYAWCCW
CAAATTCCGGAACC-
 A C G T A C G T C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AWTTCACYAWCCW-
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AWTTCACYAWCCW----
ANNTNCCCACCCANNAC
 C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AWTTCACYAWCCW
NNNNTGAATTCANNNC---
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A G T C A G T C C G T A
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C A C G T A C G T A C G T