Information for 7-AARGYMCASCAGC (Motif 5)

C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T A T C G A T G C A C G T A C T G A C G T C T A G A G T C A G T C A C G T A C G T
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.875
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.9 +/- 31.3bp
Average Position of motif in Background39.1 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AARGYMCASCAGC----
-ATGTACAGTAGCAAAG
 C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AARGYMCASCAGC---
----CACAGCAGGGGG
 C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AARGYMCASCAGC--
-----NCAGCTGCTG
 C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AARGYMCASCAGC-
------CAGCTGNT
 C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AARGYMCASCAGC
CCAGGAACAG----
 A C G T C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AARGYMCASCAGC----
-ATTTACAGTAGCAAAA
 C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:9
Orientation:forward strand
Alignment:AARGYMCASCAGC-
---------CAGCC
 C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AARGYMCASCAGC--
---SNGCACCTGCHS
 C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AARGYMCASCAGC
---NNACAGCTGC
 C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C
A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AARGYMCASCAGC
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G A C T G A G T C G T C A A G T C C G T A A T C G A T G C C T G A A C T G A G T C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T