Information for 13-CTCGTATTTTGTT (Motif 20)

A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A C G T A C G T A C G T A C G A T C G T A A G T C A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.901e+01
Information Content per bp:1.931
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 12.2bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTCGTATTTTGTT
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCGTATTTTGTT-----
-TNNTCCTTTGTTCTNNT
 A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCGTATTTTGTT-----
--NNAATTTTATTGGNTN
 A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTCGTATTTTGTT-------
----NNTTTTGTTTTGATNT
 A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCGTATTTTGTT-----
-NNNTCCTTTGTTCTNNN
 A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCGTATTTTGTT-----
-NTNAATTTTATTGNATT
 A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCGTATTTTGTT-----
--NNANTTTTATTGGNNN
 A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CTCGTATTTTGTT
-------ATTGTT
 A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCGTATTTTGTT------
--CNNNTATTGTTCNNNNN
 A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTCGTATTTTGTT--
-----NTTTTATTGG
 A G T C A C G T A G T C T C A G A C G T C G T A C G A T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G