Information for 5-GGMATCAASTKYT (Motif 2)

A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G G T C A C G T A A T C G A C G T A C G T A T C G C G T A A C G T A C G T G A T C A G T C
p-value:1e-13
log p-value:-3.032e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.3 +/- 27.3bp
Average Position of motif in Background58.7 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0166.1_Six6_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGMATCAASTKYT
AATAGGGTATCAATATT-
 A C G T A C G T A C G T A C G T A C G T A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGMATCAASTKYT
AATAGGGTATCAATTAT-
 A C G T A C G T A C G T A C G T A C G T A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGMATCAASTKYT
AATAGGGTATCATATAT-
 A C G T A C G T A C G T A C G T A C G T A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGMATCAASTKYT
AGGAAACAGCTG--
 A C G T A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGMATCAASTKYT
GATGGGGTATCATTTTT-
 A C G T A C G T A C G T A C G T A C G T A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGMATCAASTKYT
AATGGGGTATCACGTTT-
 A C G T A C G T A C G T A C G T A C G T A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGMATCAASTKYT
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGMATCAASTKYT
-TAATCAATTA--
 A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGMATCAASTKYT
GATAGGGTATCACTAAT-
 A C G T A C G T A C G T A C G T A C G T A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T A C G T

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGMATCAASTKYT
GATAGGGTATCACTAAT-
 A C G T A C G T A C G T A C G T A C G T A C T G C A T G G T C A C G T A A C G T A T G C C G T A C G T A A T G C A C G T A C G T A G T C A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T A C G T