Information for 11-GCTGTACGAC (Motif 18)

A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A T C G A G C T C G T A A G T C G T C A A C T G A G T C
p-value:1e-8
log p-value:-2.057e+01
Information Content per bp:1.866
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif32.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.2 +/- 32.6bp
Average Position of motif in Background53.4 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0065.1_Hoxc10/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTGTACGAC----
ANNTTTTACGACNTNN
 A C G T A C G T A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCTGTACGAC-----
TTNGGGTACGCCNNANN
 A C G T A C G T A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

PH0047.1_Hoxa11/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCTGTACGAC----
NNGTTTTACGACTTTA
 A C G T A C G T A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0066.1_Hoxc11/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTGTACGAC----
NNNTTTTACGACNTTN
 A C G T A C G T A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGTACGAC
GCTGTG----
 A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCTGTACGAC----
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTACGAC
NGCTN------
 A C G T A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTGTACGAC-
NTTTTACGACT
 A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

PH0067.1_Hoxc12/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCTGTACGAC----
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTGTACGAC-
NTTTTACGACC
 A C T G A G T C A C G T A C T G G C A T C T G A A T G C A C T G G T C A A G T C A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C