Information for 9-AATGHAATTY (Motif 15)

C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C
Reverse Opposite:
C T A G G T C A G T C A A G C T G A C T C G A T G T A C G T C A A G C T G A C T
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.670
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif228.8
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets46.3 +/- 21.9bp
Average Position of motif in Background48.9 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---AATGHAATTY--
TTGAATGAAATTCGA
 A C G T A C G T A C G T C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AATGHAATTY-
TAATTNVATTAN
 A C G T C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C A C G T
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AATGHAATTY
TAATTTAATTA
 A C G T C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AATGHAATTY
TAATTTAATTA
 A C G T C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AATGHAATTY
TAATTTAATTA
 A C G T C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AATGHAATTY
YTAATYNRATTA
 A C G T A C G T C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AATGHAATTY-
AGATGCAATCCC
 A C G T C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AATGHAATTY--
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AATGHAATTY-
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AATGHAATTY-
AACCCAATAAAATTCG
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A G T C A T G G C T A C T G A T C G A C A G T C A G T A G T C A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G