Information for 8-ATTGCAGACA (Motif 14)

C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A
Reverse Opposite:
C G A T A C T G G C A T A G T C A C G T A C T G G A T C C G T A T C G A G A C T
p-value:1e-9
log p-value:-2.242e+01
Information Content per bp:1.831
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif147.4
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets53.3 +/- 21.8bp
Average Position of motif in Background51.2 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:ATTGCAGACA---
---CCAGACRSVB
 C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:ATTGCAGACA-
---CCAGACAG
 C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:ATTGCAGACA-
---BCAGACWA
 C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATTGCAGACA-----
CAAATCCAGACATCACA
 A C G T A C G T C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTGCAGACA
ATGCCAGACN
 C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATTGCAGACA
GGGATTGCATNN-
 A C G T A C G T A C G T C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATTGCAGACA---
CAATTGCAAAAATAT
 A C G T A C G T C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATTGCAGACA----
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATTGCAGACA----
ATTTGCATACAATGG
 A C G T C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A A C G T A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATTGCAGACA
AAAATGCTGACT
 A C G T A C G T C T G A A C G T A C G T C T A G A G T C C G T A A C T G C G T A T G A C C G T A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T