Information for 16-CCGCCGCGGGAGG (Motif 17)

A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T G C A G T C G T A C A T C G A G T C A C T G A C T G G T A C A C T G A C T G
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.889
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets58.1 +/- 26.0bp
Average Position of motif in Background49.5 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCGCCGCGGGAGG--
NCGCAGCGGGGGGTC
 A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCGCCGCGGGAGG--
NCNCAGCGGGGGGTC
 A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCGCCGCGGGAGG--
-CACAGCGGGGGGTC
 A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

GLIS2/MA0736.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCGCCGCGGGAGG--
-CTTCGCGGGGGGTC
 A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G A C G T A C G T
A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCGCCGCGGGAGG-
----GGCGGGAARN
 A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCGCCGCGGGAGG-
---GGGCGGGAAGG
 A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCGCCGCGGGAGG--
DCHCAGCAGGRGGCC
 A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCGCCGCGGGAGG-
---GGGCGGGAAGG
 A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCGCCGCGGGAGG---
--GGCGGGGGCGGGGG
 A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCGCGGGAGG-
NCCCCCCCGGGGGGN
 A C G T A G T C T A G C A C T G A G T C G T A C A C T G A T G C A C T G A C T G A T C G C G T A A C T G A C T G A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G