Information for 4-AAWRGCCMRAATA (Motif 7)

C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A
Reverse Opposite:
A G C T C G T A A C G T A C G T A G C T A C G T C T A G A C T G A G T C A G T C C G A T A C G T A C G T
p-value:1e-13
log p-value:-3.055e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.5 +/- 23.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAWRGCCMRAATA-----
-AACACCAAAACAAAGGA
 C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAWRGCCMRAATA------
---TGCCAAAATAAACANN
 C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAWRGCCMRAATA-
ARGAGGMCAAAATGW
 A C G T C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AAWRGCCMRAATA-
----CCAAAAATAG
 C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A A C G T
A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAWRGCCMRAATA---
-ATGCTAAAAATAGAA
 C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A A C G T A C G T A C G T
A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAWRGCCMRAATA
AAAAAGCGGAAGTA
 A C G T C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AAWRGCCMRAATA
YAACBGCC------
 A C G T C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAWRGCCMRAATA
---TGCCAA----
 C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAWRGCCMRAATA--
---KCCAAAAATAGC
 C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AAWRGCCMRAATA--
---DCYAAAAATAGM
 C G T A C G T A C G T A C T A G A C T G A G T C A G T C G T C A C T G A C G T A C G T A A C G T C T G A A C G T A C G T
A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C