Information for 8-ACCCAGCAGACAG (Motif 13)

G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G C G A T A G T C A C G T A C T G A G T C A C G T A C T G C T A G A C T G A C G T
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.2 +/- 19.8bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACCCAGCAGACAG
-CACAGCAGGGGG
 G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ACCCAGCAGACAG
-----CCAGACAG
 G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACCCAGCAGACAG
CCACACAGCAGGAGA
 A C G T A C G T G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACCCAGCAGACAG--
DCHCAGCAGGRGGCC
 G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACCCAGCAGACAG
CCACACAGCAGGAGA
 A C G T A C G T G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:ACCCAGCAGACAG--
-----CCAGACRSVB
 G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACCCAGCAGACAG
ATGACTCAGCAD----
 A C G T A C G T A C G T G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACCCAGCAGACAG
AGGATGACTCAGCAC----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACCCAGCAGACAG
ATTTCCCAGVAKSCY-
 A C G T A C G T A C G T G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACCCAGCAGACAG
DCTCAGCAGG---
 G T C A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G C G T A A T G C C G T A A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T