Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-202 | -4.657e+02 | 0.0000 | 238.0 | 29.10% | 740.6 | 1.89% | motif file (matrix) |
svg |
2 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-200 | -4.606e+02 | 0.0000 | 282.0 | 34.47% | 1272.7 | 3.25% | motif file (matrix) |
svg |
3 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-173 | -3.985e+02 | 0.0000 | 278.0 | 33.99% | 1551.8 | 3.96% | motif file (matrix) |
svg |
4 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-166 | -3.836e+02 | 0.0000 | 406.0 | 49.63% | 4270.7 | 10.91% | motif file (matrix) |
svg |
5 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-149 | -3.447e+02 | 0.0000 | 282.0 | 34.47% | 1990.0 | 5.08% | motif file (matrix) |
svg |
6 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-116 | -2.678e+02 | 0.0000 | 278.0 | 33.99% | 2626.0 | 6.71% | motif file (matrix) |
svg |
7 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-106 | -2.446e+02 | 0.0000 | 313.0 | 38.26% | 3743.8 | 9.56% | motif file (matrix) |
svg |
8 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-102 | -2.369e+02 | 0.0000 | 99.0 | 12.10% | 181.2 | 0.46% | motif file (matrix) |
svg |
9 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-100 | -2.316e+02 | 0.0000 | 210.0 | 25.67% | 1623.2 | 4.15% | motif file (matrix) |
svg |
10 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-91 | -2.118e+02 | 0.0000 | 218.0 | 26.65% | 1969.7 | 5.03% | motif file (matrix) |
svg |
11 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-77 | -1.794e+02 | 0.0000 | 183.0 | 22.37% | 1606.2 | 4.10% | motif file (matrix) |
svg |
12 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-72 | -1.658e+02 | 0.0000 | 138.0 | 16.87% | 919.3 | 2.35% | motif file (matrix) |
svg |
13 |
| E-box(bHLH)/Promoter/Homer | 1e-68 | -1.580e+02 | 0.0000 | 82.0 | 10.02% | 243.7 | 0.62% | motif file (matrix) |
svg |
14 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-63 | -1.468e+02 | 0.0000 | 74.0 | 9.05% | 206.7 | 0.53% | motif file (matrix) |
svg |
15 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-55 | -1.287e+02 | 0.0000 | 142.0 | 17.36% | 1336.6 | 3.41% | motif file (matrix) |
svg |
16 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-40 | -9.361e+01 | 0.0000 | 75.0 | 9.17% | 466.0 | 1.19% | motif file (matrix) |
svg |
17 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-16 | -3.797e+01 | 0.0000 | 62.0 | 7.58% | 835.3 | 2.13% | motif file (matrix) |
svg |
18 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-14 | -3.327e+01 | 0.0000 | 64.0 | 7.82% | 979.1 | 2.50% | motif file (matrix) |
svg |
19 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-14 | -3.309e+01 | 0.0000 | 243.0 | 29.71% | 7221.9 | 18.45% | motif file (matrix) |
svg |
20 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-13 | -3.219e+01 | 0.0000 | 68.0 | 8.31% | 1111.8 | 2.84% | motif file (matrix) |
svg |
21 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-13 | -3.116e+01 | 0.0000 | 52.0 | 6.36% | 716.4 | 1.83% | motif file (matrix) |
svg |
22 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-13 | -3.112e+01 | 0.0000 | 61.0 | 7.46% | 947.7 | 2.42% | motif file (matrix) |
svg |
23 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-12 | -2.790e+01 | 0.0000 | 42.0 | 5.13% | 534.2 | 1.36% | motif file (matrix) |
svg |
24 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-11 | -2.604e+01 | 0.0000 | 52.0 | 6.36% | 822.4 | 2.10% | motif file (matrix) |
svg |
25 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.568e+01 | 0.0000 | 34.0 | 4.16% | 388.8 | 0.99% | motif file (matrix) |
svg |
26 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-9 | -2.102e+01 | 0.0000 | 118.0 | 14.43% | 3153.8 | 8.06% | motif file (matrix) |
svg |
27 |
| CRE(bZIP)/Promoter/Homer | 1e-7 | -1.816e+01 | 0.0000 | 38.0 | 4.65% | 630.6 | 1.61% | motif file (matrix) |
svg |
28 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-7 | -1.816e+01 | 0.0000 | 48.0 | 5.87% | 916.6 | 2.34% | motif file (matrix) |
svg |
29 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-7 | -1.717e+01 | 0.0000 | 169.0 | 20.66% | 5374.6 | 13.73% | motif file (matrix) |
svg |
30 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-7 | -1.704e+01 | 0.0000 | 23.0 | 2.81% | 275.4 | 0.70% | motif file (matrix) |
svg |
31 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-7 | -1.625e+01 | 0.0000 | 68.0 | 8.31% | 1627.6 | 4.16% | motif file (matrix) |
svg |
32 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-6 | -1.597e+01 | 0.0000 | 24.0 | 2.93% | 316.5 | 0.81% | motif file (matrix) |
svg |
33 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.472e+01 | 0.0000 | 83.0 | 10.15% | 2230.9 | 5.70% | motif file (matrix) |
svg |
34 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.442e+01 | 0.0000 | 203.0 | 24.82% | 7023.1 | 17.94% | motif file (matrix) |
svg |
35 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-5 | -1.347e+01 | 0.0000 | 89.0 | 10.88% | 2525.8 | 6.45% | motif file (matrix) |
svg |
36 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-5 | -1.288e+01 | 0.0000 | 303.0 | 37.04% | 11570.6 | 29.56% | motif file (matrix) |
svg |
37 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-5 | -1.266e+01 | 0.0000 | 49.0 | 5.99% | 1146.6 | 2.93% | motif file (matrix) |
svg |
38 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-5 | -1.219e+01 | 0.0000 | 121.0 | 14.79% | 3856.4 | 9.85% | motif file (matrix) |
svg |
39 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-5 | -1.199e+01 | 0.0001 | 94.0 | 11.49% | 2814.2 | 7.19% | motif file (matrix) |
svg |
40 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.170e+01 | 0.0001 | 36.0 | 4.40% | 762.7 | 1.95% | motif file (matrix) |
svg |
41 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-4 | -1.141e+01 | 0.0001 | 42.0 | 5.13% | 967.3 | 2.47% | motif file (matrix) |
svg |
42 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-4 | -1.121e+01 | 0.0001 | 34.0 | 4.16% | 717.0 | 1.83% | motif file (matrix) |
svg |
43 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-4 | -1.113e+01 | 0.0001 | 18.0 | 2.20% | 260.6 | 0.67% | motif file (matrix) |
svg |
44 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-4 | -1.085e+01 | 0.0002 | 47.0 | 5.75% | 1160.9 | 2.97% | motif file (matrix) |
svg |
45 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.069e+01 | 0.0002 | 49.0 | 5.99% | 1237.4 | 3.16% | motif file (matrix) |
svg |
46 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-4 | -1.055e+01 | 0.0002 | 58.0 | 7.09% | 1563.4 | 3.99% | motif file (matrix) |
svg |
47 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.041e+01 | 0.0002 | 68.0 | 8.31% | 1938.8 | 4.95% | motif file (matrix) |
svg |
48 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -1.038e+01 | 0.0002 | 89.0 | 10.88% | 2740.7 | 7.00% | motif file (matrix) |
svg |
49 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.037e+01 | 0.0002 | 49.0 | 5.99% | 1253.0 | 3.20% | motif file (matrix) |
svg |
50 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-4 | -1.029e+01 | 0.0002 | 71.0 | 8.68% | 2058.1 | 5.26% | motif file (matrix) |
svg |
51 |
| NFY(CCAAT)/Promoter/Homer | 1e-4 | -1.002e+01 | 0.0003 | 59.0 | 7.21% | 1630.3 | 4.16% | motif file (matrix) |
svg |
52 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-4 | -1.002e+01 | 0.0003 | 86.0 | 10.51% | 2651.8 | 6.77% | motif file (matrix) |
svg |
53 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.000e+01 | 0.0003 | 41.0 | 5.01% | 996.0 | 2.54% | motif file (matrix) |
svg |
54 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-4 | -9.826e+00 | 0.0004 | 33.0 | 4.03% | 737.7 | 1.88% | motif file (matrix) |
svg |
55 |
| Sp1(Zf)/Promoter/Homer | 1e-4 | -9.619e+00 | 0.0004 | 36.0 | 4.40% | 845.0 | 2.16% | motif file (matrix) |
svg |
56 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-4 | -9.610e+00 | 0.0004 | 30.0 | 3.67% | 649.9 | 1.66% | motif file (matrix) |
svg |
57 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -9.374e+00 | 0.0005 | 59.0 | 7.21% | 1670.6 | 4.27% | motif file (matrix) |
svg |
58 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-3 | -9.148e+00 | 0.0007 | 89.0 | 10.88% | 2839.8 | 7.25% | motif file (matrix) |
svg |
59 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-3 | -9.147e+00 | 0.0007 | 63.0 | 7.70% | 1834.8 | 4.69% | motif file (matrix) |
svg |
60 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -9.134e+00 | 0.0007 | 22.0 | 2.69% | 419.6 | 1.07% | motif file (matrix) |
svg |
61 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -8.523e+00 | 0.0012 | 29.0 | 3.55% | 659.9 | 1.69% | motif file (matrix) |
svg |
62 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-3 | -8.479e+00 | 0.0012 | 23.0 | 2.81% | 470.9 | 1.20% | motif file (matrix) |
svg |
63 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-3 | -8.089e+00 | 0.0018 | 101.0 | 12.35% | 3419.1 | 8.73% | motif file (matrix) |
svg |
64 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.756e+00 | 0.0024 | 41.0 | 5.01% | 1110.3 | 2.84% | motif file (matrix) |
svg |
65 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -7.748e+00 | 0.0024 | 33.0 | 4.03% | 828.1 | 2.12% | motif file (matrix) |
svg |
66 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-3 | -7.474e+00 | 0.0031 | 36.0 | 4.40% | 947.6 | 2.42% | motif file (matrix) |
svg |
67 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-3 | -7.336e+00 | 0.0035 | 11.0 | 1.34% | 159.8 | 0.41% | motif file (matrix) |
svg |
68 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -6.772e+00 | 0.0061 | 95.0 | 11.61% | 3309.5 | 8.45% | motif file (matrix) |
svg |
69 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.280e+00 | 0.0099 | 10.0 | 1.22% | 155.9 | 0.40% | motif file (matrix) |
svg |
70 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.136e+00 | 0.0112 | 36.0 | 4.40% | 1025.3 | 2.62% | motif file (matrix) |
svg |
71 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -6.026e+00 | 0.0124 | 69.0 | 8.44% | 2321.7 | 5.93% | motif file (matrix) |
svg |
72 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -6.005e+00 | 0.0125 | 41.0 | 5.01% | 1221.4 | 3.12% | motif file (matrix) |
svg |
73 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.987e+00 | 0.0125 | 64.0 | 7.82% | 2123.1 | 5.42% | motif file (matrix) |
svg |
74 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-2 | -5.902e+00 | 0.0134 | 6.0 | 0.73% | 65.2 | 0.17% | motif file (matrix) |
svg |
75 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -5.772e+00 | 0.0151 | 13.0 | 1.59% | 253.2 | 0.65% | motif file (matrix) |
svg |
76 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.703e+00 | 0.0160 | 129.0 | 15.77% | 4886.7 | 12.48% | motif file (matrix) |
svg |
77 |
| GFY(?)/Promoter/Homer | 1e-2 | -5.313e+00 | 0.0233 | 9.0 | 1.10% | 150.6 | 0.38% | motif file (matrix) |
svg |
78 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.273e+00 | 0.0239 | 5.0 | 0.61% | 52.7 | 0.13% | motif file (matrix) |
svg |
79 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.165e+00 | 0.0263 | 31.0 | 3.79% | 902.1 | 2.30% | motif file (matrix) |
svg |
80 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.150e+00 | 0.0264 | 54.0 | 6.60% | 1800.9 | 4.60% | motif file (matrix) |
svg |
81 |
| NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer | 1e-2 | -5.093e+00 | 0.0276 | 6.0 | 0.73% | 77.5 | 0.20% | motif file (matrix) |
svg |
82 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -4.990e+00 | 0.0302 | 36.0 | 4.40% | 1104.3 | 2.82% | motif file (matrix) |
svg |
83 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.974e+00 | 0.0303 | 26.0 | 3.18% | 729.4 | 1.86% | motif file (matrix) |
svg |
84 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.806e+00 | 0.0355 | 97.0 | 11.86% | 3635.7 | 9.29% | motif file (matrix) |
svg |
85 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -4.660e+00 | 0.0405 | 20.0 | 2.44% | 530.3 | 1.35% | motif file (matrix) |
svg |
86 |
| NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer | 1e-2 | -4.646e+00 | 0.0406 | 10.0 | 1.22% | 197.0 | 0.50% | motif file (matrix) |
svg |
87 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -4.634e+00 | 0.0406 | 39.0 | 4.77% | 1249.7 | 3.19% | motif file (matrix) |
svg |
88 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-2 | -4.631e+00 | 0.0406 | 57.0 | 6.97% | 1974.4 | 5.04% | motif file (matrix) |
svg |