Information for 15-GCCAAAAAAA (Motif 18)

T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A
Reverse Opposite:
C G A T C G A T C A G T A C G T C A G T C G A T A C G T A C T G C A T G A T G C
p-value:1e-8
log p-value:-1.879e+01
Information Content per bp:1.819
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif242.8
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets50.0 +/- 23.1bp
Average Position of motif in Background46.4 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCCAAAAAAA-
-CCAATAAAAC
 T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A A C G T
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

PH0057.1_Hoxb13/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GCCAAAAAAA----
AACCCAATAAAATTCG
 A C G T A C G T T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCCAAAAAAA-
-CCAATAAAAA
 T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A A C G T
A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCCAAAAAAA-----
GTTCAAAAAAAAAATTC
 A C G T A C G T T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCCAAAAAAA----
CTACCAATAAAATTCT
 A C G T A C G T T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAAAAAA-----
TGCCAAAATAAACANN
 A C G T T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCCAAAAAAA-
-CCAATAAAAA
 T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A A C G T
A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAAAAA-
TACTGGAAAAAAAA
 A C G T A C G T A C G T T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCCAAAAAAA
AAGCCATAAAA-
 A C G T A C G T T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCCAAAAAAA---
AGCCGAAAAAAAAAT
 A C G T A C G T T A C G G T A C G T A C C G T A G C T A G T C A C G T A G T C A C G T A C G T A A C G T A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T