Information for 9-CCCTTTGTCTGCT (Motif 13)

A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T
Reverse Opposite:
C G T A C T A G A G T C C G T A C T A G C G T A A G T C C G T A C T G A C G T A A C T G A C T G A T C G
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.4 +/- 24.6bp
Average Position of motif in Background46.2 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTGTCTGCT-
ANTCCTTTGTCTNNNN
 A C G T A C G T A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCTGCT
-CCTTTGTTTT--
 A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCTGCT
-CCTTTGTT----
 A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCTGCT
-CCWTTGTY----
 A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCTGCT
-CCWTTGTYYB--
 A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCTGCT
-CCATTGTTTT--
 A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCCTTTGTCTGCT
--CTTTGT-----
 A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCTGCT---
-CCATTGTATGCAAAT
 A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCCTTTGTCTGCT
AGGVNCCTTTGT-----
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCTGCT
-YCTTTGTTCC--
 A T G C A G T C A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G A T A C T G A G T C A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T