Information for 4-YTGWTTCAAMWSCAAA (Motif 8)

A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A
Reverse Opposite:
C A G T A C G T A C G T A T C G A T C G C G A T A C G T C G A T A C G T C T A G C G T A C G T A C G T A A T G C G T C A C T G A
p-value:1e-13
log p-value:-3.072e+01
Information Content per bp:1.734
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.8 +/- 18.9bp
Average Position of motif in Background44.9 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:YTGWTTCAAMWSCAAA-
--CATTGTTATGCAAAT
 A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A A C G T
A C G T A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:YTGWTTCAAMWSCAAA-
--CTTTGTTATGCAAAT
 A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A A C G T
A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:YTGWTTCAAMWSCAAA
--NATTCAAAT-----
 A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:YTGWTTCAAMWSCAAA
CGGTTTCAAA------
 A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:YTGWTTCAAMWSCAAA-
-------ATATGCAAAT
 A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:YTGWTTCAAMWSCAAA
TGGTTTCAGT------
 A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:YTGWTTCAAMWSCAAA-
--BAGTCATANTGAAAG
 A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A A C G T
A C G T A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:YTGWTTCAAMWSCAAA---
-WNAGTCADAVTGAAACTN
 A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A A C G T A C G T A C G T
A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:YTGWTTCAAMWSCAAA
-TGAGTCA--------
 A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----YTGWTTCAAMWSCAAA
NNCATTCATTCATNNN----
 A C G T A C G T A C G T A C G T A G C T A C G T A T C G C G A T A C G T A C G T A G T C G T C A C G T A G T C A C G T A A T G C A T G C C G T A G T C A G T C A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T A C G T