Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-224 | -5.161e+02 | 0.0000 | 183.0 | 20.15% | 243.6 | 0.51% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-143 | -3.315e+02 | 0.0000 | 164.0 | 18.06% | 492.4 | 1.04% | motif file (matrix) |
svg |
3 |
| NFY(CCAAT)/Promoter/Homer | 1e-17 | -4.012e+01 | 0.0000 | 97.0 | 10.68% | 1880.1 | 3.96% | motif file (matrix) |
svg |
4 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.589e+01 | 0.0000 | 51.0 | 5.62% | 666.7 | 1.40% | motif file (matrix) |
svg |
5 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-13 | -3.130e+01 | 0.0000 | 134.0 | 14.76% | 3502.2 | 7.38% | motif file (matrix) |
svg |
6 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-11 | -2.711e+01 | 0.0000 | 96.0 | 10.57% | 2299.9 | 4.85% | motif file (matrix) |
svg |
7 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-11 | -2.606e+01 | 0.0000 | 164.0 | 18.06% | 4973.3 | 10.48% | motif file (matrix) |
svg |
8 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-11 | -2.580e+01 | 0.0000 | 58.0 | 6.39% | 1081.7 | 2.28% | motif file (matrix) |
svg |
9 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-11 | -2.555e+01 | 0.0000 | 80.0 | 8.81% | 1803.3 | 3.80% | motif file (matrix) |
svg |
10 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-11 | -2.552e+01 | 0.0000 | 183.0 | 20.15% | 5798.3 | 12.22% | motif file (matrix) |
svg |
11 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-10 | -2.372e+01 | 0.0000 | 28.0 | 3.08% | 314.8 | 0.66% | motif file (matrix) |
svg |
12 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-9 | -2.298e+01 | 0.0000 | 56.0 | 6.17% | 1101.7 | 2.32% | motif file (matrix) |
svg |
13 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-9 | -2.102e+01 | 0.0000 | 68.0 | 7.49% | 1566.0 | 3.30% | motif file (matrix) |
svg |
14 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-9 | -2.082e+01 | 0.0000 | 138.0 | 15.20% | 4250.2 | 8.96% | motif file (matrix) |
svg |
15 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-8 | -2.012e+01 | 0.0000 | 39.0 | 4.30% | 666.4 | 1.40% | motif file (matrix) |
svg |
16 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-8 | -1.995e+01 | 0.0000 | 19.0 | 2.09% | 172.1 | 0.36% | motif file (matrix) |
svg |
17 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-8 | -1.974e+01 | 0.0000 | 128.0 | 14.10% | 3913.7 | 8.25% | motif file (matrix) |
svg |
18 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-8 | -1.959e+01 | 0.0000 | 110.0 | 12.11% | 3200.4 | 6.74% | motif file (matrix) |
svg |
19 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-8 | -1.954e+01 | 0.0000 | 99.0 | 10.90% | 2773.9 | 5.84% | motif file (matrix) |
svg |
20 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-8 | -1.923e+01 | 0.0000 | 222.0 | 24.45% | 8015.0 | 16.89% | motif file (matrix) |
svg |
21 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-8 | -1.904e+01 | 0.0000 | 21.0 | 2.31% | 224.4 | 0.47% | motif file (matrix) |
svg |
22 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-8 | -1.871e+01 | 0.0000 | 19.0 | 2.09% | 186.8 | 0.39% | motif file (matrix) |
svg |
23 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-8 | -1.853e+01 | 0.0000 | 28.0 | 3.08% | 399.5 | 0.84% | motif file (matrix) |
svg |
24 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-7 | -1.747e+01 | 0.0000 | 80.0 | 8.81% | 2159.3 | 4.55% | motif file (matrix) |
svg |
25 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-7 | -1.739e+01 | 0.0000 | 47.0 | 5.18% | 992.1 | 2.09% | motif file (matrix) |
svg |
26 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.703e+01 | 0.0000 | 59.0 | 6.50% | 1413.3 | 2.98% | motif file (matrix) |
svg |
27 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-7 | -1.671e+01 | 0.0000 | 83.0 | 9.14% | 2314.2 | 4.88% | motif file (matrix) |
svg |
28 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-6 | -1.606e+01 | 0.0000 | 353.0 | 38.88% | 14577.5 | 30.72% | motif file (matrix) |
svg |
29 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.573e+01 | 0.0000 | 57.0 | 6.28% | 1398.2 | 2.95% | motif file (matrix) |
svg |
30 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.416e+01 | 0.0000 | 53.0 | 5.84% | 1325.1 | 2.79% | motif file (matrix) |
svg |
31 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.381e+01 | 0.0000 | 50.0 | 5.51% | 1233.9 | 2.60% | motif file (matrix) |
svg |
32 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.349e+01 | 0.0000 | 87.0 | 9.58% | 2669.3 | 5.62% | motif file (matrix) |
svg |
33 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-5 | -1.332e+01 | 0.0000 | 85.0 | 9.36% | 2600.0 | 5.48% | motif file (matrix) |
svg |
34 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.302e+01 | 0.0000 | 28.0 | 3.08% | 527.1 | 1.11% | motif file (matrix) |
svg |
35 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-5 | -1.302e+01 | 0.0000 | 119.0 | 13.11% | 4040.9 | 8.51% | motif file (matrix) |
svg |
36 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.112e+01 | 0.0001 | 67.0 | 7.38% | 2024.2 | 4.27% | motif file (matrix) |
svg |
37 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.073e+01 | 0.0002 | 257.0 | 28.30% | 10650.7 | 22.44% | motif file (matrix) |
svg |
38 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-4 | -1.054e+01 | 0.0003 | 35.0 | 3.85% | 844.7 | 1.78% | motif file (matrix) |
svg |
39 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-4 | -1.037e+01 | 0.0003 | 33.0 | 3.63% | 781.2 | 1.65% | motif file (matrix) |
svg |
40 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.007e+01 | 0.0004 | 36.0 | 3.96% | 900.8 | 1.90% | motif file (matrix) |
svg |
41 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-4 | -9.731e+00 | 0.0005 | 131.0 | 14.43% | 4888.5 | 10.30% | motif file (matrix) |
svg |
42 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -9.569e+00 | 0.0006 | 6.0 | 0.66% | 35.3 | 0.07% | motif file (matrix) |
svg |
43 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -9.167e+00 | 0.0009 | 71.0 | 7.82% | 2329.1 | 4.91% | motif file (matrix) |
svg |
44 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -8.978e+00 | 0.0010 | 35.0 | 3.85% | 915.6 | 1.93% | motif file (matrix) |
svg |
45 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.628e+00 | 0.0014 | 25.0 | 2.75% | 575.3 | 1.21% | motif file (matrix) |
svg |
46 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -8.608e+00 | 0.0014 | 30.0 | 3.30% | 751.9 | 1.58% | motif file (matrix) |
svg |
47 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.476e+00 | 0.0016 | 38.0 | 4.19% | 1053.7 | 2.22% | motif file (matrix) |
svg |
48 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.082e+00 | 0.0023 | 42.0 | 4.63% | 1230.2 | 2.59% | motif file (matrix) |
svg |
49 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.052e+00 | 0.0024 | 43.0 | 4.74% | 1271.2 | 2.68% | motif file (matrix) |
svg |
50 |
| Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer | 1e-3 | -7.738e+00 | 0.0032 | 33.0 | 3.63% | 904.9 | 1.91% | motif file (matrix) |
svg |
51 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-3 | -7.655e+00 | 0.0034 | 38.0 | 4.19% | 1100.9 | 2.32% | motif file (matrix) |
svg |
52 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-3 | -7.649e+00 | 0.0034 | 11.0 | 1.21% | 168.0 | 0.35% | motif file (matrix) |
svg |
53 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.602e+00 | 0.0034 | 27.0 | 2.97% | 689.5 | 1.45% | motif file (matrix) |
svg |
54 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.544e+00 | 0.0036 | 17.0 | 1.87% | 348.4 | 0.73% | motif file (matrix) |
svg |
55 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -7.184e+00 | 0.0050 | 74.0 | 8.15% | 2632.6 | 5.55% | motif file (matrix) |
svg |
56 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-3 | -6.984e+00 | 0.0060 | 80.0 | 8.81% | 2915.3 | 6.14% | motif file (matrix) |
svg |
57 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.674e+00 | 0.0081 | 7.0 | 0.77% | 83.2 | 0.18% | motif file (matrix) |
svg |
58 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-2 | -6.536e+00 | 0.0091 | 16.0 | 1.76% | 349.3 | 0.74% | motif file (matrix) |
svg |
59 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.249e+00 | 0.0119 | 126.0 | 13.88% | 5102.6 | 10.75% | motif file (matrix) |
svg |
60 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.058e+00 | 0.0142 | 20.0 | 2.20% | 507.4 | 1.07% | motif file (matrix) |
svg |
61 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.864e+00 | 0.0169 | 30.0 | 3.30% | 897.7 | 1.89% | motif file (matrix) |
svg |
62 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.845e+00 | 0.0170 | 83.0 | 9.14% | 3178.6 | 6.70% | motif file (matrix) |
svg |
63 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.823e+00 | 0.0171 | 28.0 | 3.08% | 821.7 | 1.73% | motif file (matrix) |
svg |
64 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.721e+00 | 0.0186 | 57.0 | 6.28% | 2037.6 | 4.29% | motif file (matrix) |
svg |
65 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.710e+00 | 0.0186 | 96.0 | 10.57% | 3788.3 | 7.98% | motif file (matrix) |
svg |
66 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.661e+00 | 0.0192 | 31.0 | 3.41% | 951.0 | 2.00% | motif file (matrix) |
svg |
67 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.594e+00 | 0.0202 | 63.0 | 6.94% | 2313.4 | 4.87% | motif file (matrix) |
svg |
68 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.539e+00 | 0.0210 | 7.0 | 0.77% | 102.9 | 0.22% | motif file (matrix) |
svg |
69 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.446e+00 | 0.0228 | 11.0 | 1.21% | 222.9 | 0.47% | motif file (matrix) |
svg |
70 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.404e+00 | 0.0234 | 43.0 | 4.74% | 1465.2 | 3.09% | motif file (matrix) |
svg |
71 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -5.311e+00 | 0.0253 | 48.0 | 5.29% | 1687.3 | 3.56% | motif file (matrix) |
svg |
72 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -5.300e+00 | 0.0253 | 36.0 | 3.96% | 1180.3 | 2.49% | motif file (matrix) |
svg |
73 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.279e+00 | 0.0254 | 187.0 | 20.59% | 8189.0 | 17.26% | motif file (matrix) |
svg |
74 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.183e+00 | 0.0276 | 32.0 | 3.52% | 1024.5 | 2.16% | motif file (matrix) |
svg |
75 |
| STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer | 1e-2 | -5.127e+00 | 0.0288 | 19.0 | 2.09% | 515.2 | 1.09% | motif file (matrix) |
svg |
76 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.102e+00 | 0.0291 | 80.0 | 8.81% | 3136.4 | 6.61% | motif file (matrix) |
svg |
77 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -5.031e+00 | 0.0309 | 34.0 | 3.74% | 1118.3 | 2.36% | motif file (matrix) |
svg |
78 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -5.011e+00 | 0.0311 | 43.0 | 4.74% | 1500.3 | 3.16% | motif file (matrix) |
svg |
79 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-2 | -4.979e+00 | 0.0317 | 51.0 | 5.62% | 1850.5 | 3.90% | motif file (matrix) |
svg |
80 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.908e+00 | 0.0336 | 7.0 | 0.77% | 115.8 | 0.24% | motif file (matrix) |
svg |
81 |
| ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer | 1e-2 | -4.832e+00 | 0.0358 | 9.0 | 0.99% | 177.1 | 0.37% | motif file (matrix) |
svg |
82 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -4.804e+00 | 0.0364 | 14.0 | 1.54% | 347.1 | 0.73% | motif file (matrix) |
svg |
83 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-2 | -4.754e+00 | 0.0378 | 66.0 | 7.27% | 2544.0 | 5.36% | motif file (matrix) |
svg |
84 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -4.737e+00 | 0.0380 | 91.0 | 10.02% | 3695.9 | 7.79% | motif file (matrix) |
svg |