p-value: | 1e-13 |
log p-value: | -3.129e+01 |
Information Content per bp: | 1.763 |
Number of Target Sequences with motif | 23.0 |
Percentage of Target Sequences with motif | 2.53% |
Number of Background Sequences with motif | 143.3 |
Percentage of Background Sequences with motif | 0.30% |
Average Position of motif in Targets | 51.0 +/- 25.1bp |
Average Position of motif in Background | 46.5 +/- 28.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.05 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx1/MA0509.1/Jaspar
Match Rank: | 1 |
Score: | 0.81 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TCATGGCAAC GTTGCCATGGCAAC |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 2 |
Score: | 0.80 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCATGGCAAC-- SCCTAGCAACAG |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 3 |
Score: | 0.79 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCATGGCAAC- TTGCCATGGCAACN |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 4 |
Score: | 0.79 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCATGGCAAC- TTGCCATGGCAACC |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 5 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCATGGCAAC--- TACCATAGCAACGGT |
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RFX4/MA0799.1/Jaspar
Match Rank: | 6 |
Score: | 0.76 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCATGGCAAC- CGTTGCCATGGCAACG |
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RFX3/MA0798.1/Jaspar
Match Rank: | 7 |
Score: | 0.76 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TCATGGCAAC- CGTTGCCATGGCAACN |
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RFX2/MA0600.2/Jaspar
Match Rank: | 8 |
Score: | 0.75 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TCATGGCAAC- CGTTGCCATGGCAACG |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 9 |
Score: | 0.75 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCATGGCAAC--- CCGCATAGCAACGGA |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 10 |
Score: | 0.74 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TCATGGCAAC KGTTGCCATGGCAAC |
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