Information for 8-KTAATTAAAT (Motif 6)

C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T
Reverse Opposite:
G C T A C G A T A C G T G A C T T G C A C G T A C G A T A C G T G C T A G T C A
p-value:1e-15
log p-value:-3.566e+01
Information Content per bp:1.624
Number of Target Sequences with motif133.0
Percentage of Target Sequences with motif14.65%
Number of Background Sequences with motif3268.8
Percentage of Background Sequences with motif6.89%
Average Position of motif in Targets51.6 +/- 26.0bp
Average Position of motif in Background48.7 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:KTAATTAAAT
YTAATTAVHT
 C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T
A G T C G A C T T C G A C G T A A C G T A C G T C T G A T C G A G C A T G C A T

LMX1A/MA0702.1/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:KTAATTAAAT
TTAATTAA--
 C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T
A G C T G A C T C T G A G C T A G C A T C G A T C T G A T C G A A C G T A C G T

Lhx4/MA0704.1/Jaspar

Match Rank:3
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:KTAATTAAAT
TTAATTAA--
 C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T
A G C T G A C T T C G A C G T A C G A T A C G T C T G A T C G A A C G T A C G T

Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer

Match Rank:4
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:KTAATTAAAT
YTAATTARNN
 C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T
A G T C G A C T T G C A G T C A A C G T A C G T C T G A T C A G G T A C G C A T

LMX1B/MA0703.1/Jaspar

Match Rank:5
Score:0.88
Offset:0
Orientation:forward strand
Alignment:KTAATTAAAT
TTAATTAA--
 C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T
A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----KTAATTAAAT---
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T A C G T A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

MEOX2/MA0706.1/Jaspar

Match Rank:7
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-KTAATTAAAT
AGTAATTAAC-
 A C G T C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T

mix-a/MA0621.1/Jaspar

Match Rank:8
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-KTAATTAAAT
NCTAATTAANN
 A C G T C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

PH0071.1_Hoxc6/Jaspar

Match Rank:9
Score:0.88
Offset:-5
Orientation:reverse strand
Alignment:-----KTAATTAAAT--
NNTNATTAATTAATTTG
 A C G T A C G T A C G T A C G T A C G T C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T A C G T A C G T
G C A T A C G T A G C T G C A T T G C A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A G C T C G A T G A C T T C A G

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:10
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----KTAATTAAAT---
CNNAGTAATTAATTNNC
 A C G T A C G T A C G T A C G T C A G T C G A T T G C A C G T A A C G T A C G T C T G A T G C A G C T A C G A T A C G T A C G T A C G T
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C