Information for 7-YKCYVATTGG (Motif 5)

G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G
Reverse Opposite:
A T G C A G T C C G T A G T C A A C G T A T C G C T G A A T C G G T A C C T A G
p-value:1e-16
log p-value:-3.827e+01
Information Content per bp:1.705
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif6.72%
Number of Background Sequences with motif877.1
Percentage of Background Sequences with motif1.85%
Average Position of motif in Targets51.1 +/- 24.6bp
Average Position of motif in Background48.6 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:YKCYVATTGG--
--CCGATTGGCT
 G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:YKCYVATTGG-------
--CTGATTGGTCNATTT
 G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:YKCYVATTGG-----
---TGATTGGCTANN
 G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----YKCYVATTGG----
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

MSX1/MA0666.1/Jaspar

Match Rank:5
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:YKCYVATTGG
--NTAATTGG
 G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G
A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G

EN2/MA0642.1/Jaspar

Match Rank:6
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:YKCYVATTGG-
-GNTAATTGGN
 G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G A C G T
A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:YKCYVATTGG
--NTAATTGG
 G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G
A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

PH0089.1_Isx/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--YKCYVATTGG----
ACTCCTAATTAGTCGT
 A C G T A C G T G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

Msx3/MA0709.1/Jaspar

Match Rank:9
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:YKCYVATTGG
--NTAATTGN
 G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G
A C G T A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G

LBX2/MA0699.1/Jaspar

Match Rank:10
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:YKCYVATTGG-
-NNTAATTGGN
 G A T C C A T G T A G C A G C T T A G C C G T A A C G T A C G T A C T G A T C G A C G T
A C G T A T C G G A T C G C A T T G C A T G C A A C G T A C G T C T A G T C A G A G T C