Information for 7-CRTCCTTCCCCCAGGG (Motif 20)

A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C T G A C T G A T C G A C T G A C T G C G T A G T C A A C T G A T C G G T C A A G C T A C T G
p-value:1e-8
log p-value:-1.903e+01
Information Content per bp:1.898
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 27.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:CRTCCTTCCCCCAGGG---
-------TCCCCTGGGGAC
 A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CRTCCTTCCCCCAGGG---
----NTCCCCTCAGGGANT
 A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CRTCCTTCCCCCAGGG---
----NTCGCCTCAGGCAAT
 A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CRTCCTTCCCCCAGGG--
-----TGCCCNNAGGGCA
 A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CRTCCTTCCCCCAGGG
----WTGSCCTSAGGS
 A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CRTCCTTCCCCCAGGG--
-----TGCCCTNAGGGCA
 A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CRTCCTTCCCCCAGGG----
-----CCCCCCCGGGGGGGT
 A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CRTCCTTCCCCCAGGG---
-----TTGCCCTAGGGCAT
 A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CRTCCTTCCCCCAGGG
--CCCCTCCCCCAC--
 A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G
A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CRTCCTTCCCCCAGGG---
-------GCCTCAGGGCAT
 A G T C C T A G A C G T A T G C A G T C A C G T A C G T A G T C A G T C A T G C A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T