Information for 2-TGTTGCTAGGGAA (Motif 2)

A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A
Reverse Opposite:
A G C T A C G T A T G C A G T C A G T C A G C T C T G A C T A G T A G C C G T A C G T A G T A C G T C A
p-value:1e-23
log p-value:-5.473e+01
Information Content per bp:1.796
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 28.1bp
Average Position of motif in Background71.8 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:TGTTGCTAGGGAA--
KGTTGCTAGGMAACA
 A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGCTAGGGAA
CTGTTGCTAGGS--
 A C G T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGCTAGGGAA
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------TGTTGCTAGGGAA----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGCTAGGGAA
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGTTGCTAGGGAA--
-GTTGCCATGGNAAC
 A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A A C G T A C G T
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGTTGCTAGGGAA
--TTTCCAGGAAA
 A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A
A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGTTGCTAGGGAA---
--TTTCCAGGAAATGG
 A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGTTGCTAGGGAA
--CTTCTGGGAAA
 A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGTTGCTAGGGAA
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C T G A A C T G A C T G A T C G G T C A C T G A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A