Information for 3-TSGCYCCYKCKRCTKT (Motif 12)

C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T
Reverse Opposite:
C T G A G T C A C G T A A C T G A G T C G T C A T A C G G T C A C T A G C T A G A T C G C T A G C A T G A G T C A T G C G T C A
p-value:1e-11
log p-value:-2.612e+01
Information Content per bp:1.683
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif18.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.3 +/- 24.4bp
Average Position of motif in Background42.8 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TSGCYCCYKCKRCTKT----
----TNNTGCTACTGTNNNN
 C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:11
Orientation:forward strand
Alignment:TSGCYCCYKCKRCTKT-
-----------GCTGTG
 C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TSGCYCCYKCKRCTKT----
----CNNNGCTACTGTANNN
 C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TSGCYCCYKCKRCTKT-
-----CCCCCTGCTGTG
 C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TSGCYCCYKCKRCTKT-
------NNGCAGCTGTT
 C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TSGCYCCYKCKRCTKT-
------NNGCAGCTGTC
 C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:TSGCYCCYKCKRCTKT
----------NGCTN-
 C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:TSGCYCCYKCKRCTKT-
---------CAGCTGTT
 C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TSGCYCCYKCKRCTKT
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:TSGCYCCYKCKRCTKT----
-------TGCAGCTGTCCCT
 C A G T T A C G C T A G G A T C A G T C A T G C A G T C G A T C A C G T A T G C A C G T C T A G A G T C A C G T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T