Information for 5-ABCCAGCTGGBCY (Motif 3)

C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
Reverse Opposite:
C T A G T A C G T C A G T A G C A G T C C G T A A C T G G T A C C G A T A C T G A C T G T A C G G C A T
p-value:1e-14
log p-value:-3.449e+01
Information Content per bp:1.659
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif7.07%
Number of Background Sequences with motif1000.7
Percentage of Background Sequences with motif2.12%
Average Position of motif in Targets51.7 +/- 22.2bp
Average Position of motif in Background49.2 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:1
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:ABCCAGCTGGBCY
-GCCAGCTGBTNB
 C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:ABCCAGCTGGBCY
-NVCAGCTGBBNN
 C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:3
Score:0.85
Offset:2
Orientation:forward strand
Alignment:ABCCAGCTGGBCY
--VCAGCTGBNN-
 C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.84
Offset:3
Orientation:reverse strand
Alignment:ABCCAGCTGGBCY
---CAGCTGNT--
 C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.84
Offset:2
Orientation:forward strand
Alignment:ABCCAGCTGGBCY
--ACAGCTGTTN-
 C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.83
Offset:0
Orientation:forward strand
Alignment:ABCCAGCTGGBCY
NAACAGCTGG---
 C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.83
Offset:0
Orientation:forward strand
Alignment:ABCCAGCTGGBCY
NNACAGCTGC---
 C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:ABCCAGCTGGBCY
--HCAGCTGDTN-
 C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.83
Offset:2
Orientation:forward strand
Alignment:ABCCAGCTGGBCY
--NCAGCTGCTG-
 C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ABCCAGCTGGBCY
-AACAKATGGY--
 C G T A A T G C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A T G C G A C T
A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T