Information for 17-GCCTGTTCCTGGA (Motif 23)

A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A
Reverse Opposite:
A G C T A G T C A G T C C G T A A C T G A T C G G T C A C G T A A G T C C G T A A C T G A C T G G T A C
p-value:1e-7
log p-value:-1.794e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 31.6bp
Average Position of motif in Background54.7 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GCCTGTTCCTGGA
--CTGTTCCTGG-
 A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GCCTGTTCCTGGA------
----TTTCCTGGAAAGNNN
 A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCCTGTTCCTGGA-----
----TTTCCTAGAAAGCA
 A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GCCTGTTCCTGGA--
-----TTCCNGGAAG
 A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCCTGTTCCTGGA---
--NNCTTCCNGGAAGN
 A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCTGTTCCTGGA---
----TTTCCNGGAAAN
 A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCTGTTCCTGGA--
----TTTCCTGGAAA
 A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCTGTTCCTGGA--
-NNNTTTCCTGGAAA
 A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A A C G T A C G T
A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCTGTTCCTGGA
TKCTGTTCCA---
 A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCTGTTCCTGGA---
--NATTTCCNGGAAAT
 A C T G A G T C A G T C A C G T A C T G A C G T A C G T A T G C A G T C A C G T A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T