p-value: | 1e-9 |
log p-value: | -2.137e+01 |
Information Content per bp: | 1.470 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.58% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 39.6 +/- 25.8bp |
Average Position of motif in Background | 44.6 +/- 18.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox3/MA0514.1/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCCGTTTGTCCT ---CCTTTGTTTT |
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ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTCCGTTTGTCCT--- -WCATTTTGKCCTCYT |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCCGTTTGTCCT ---YCTTTGTTCC |
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NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTCCGTTTGTCCT--- NTGACTCANTTTTTCCANTN |
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Sox6/MA0515.1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCCGTTTGTCCT ---CCATTGTTTT |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | CTCCGTTTGTCCT-- -------TGACCTYA |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTCCGTTTGTCCT --NCCATTGTTC- |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCCGTTTGTCCT ---CCATTGTTNY |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCCGTTTGTCCT ---CCWTTGTY-- |
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PB0032.1_IRC900814_1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTCCGTTTGTCCT---- -GNNATTTGTCGTAANN |
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