Information for 8-CGACGTCTCC (Motif 16)

A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A A C T G C T G A A T G C C T A G A G C T A T G C A T C G
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.803
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif30.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.9 +/- 28.5bp
Average Position of motif in Background47.4 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0131.1_Gmeb1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CGACGTCTCC--
TNAACGACGTCGNCCA
 A C G T A C G T A C G T A C G T A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

CREB3/MA0638.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGACGTCTCC-
GTGCCACGTCATCA
 A C G T A C G T A C G T A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGACGTCTCC-
GTGACGTCACCG
 A C G T A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C A C G T
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGACGTCTCC
--ACGTCA--
 A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C
A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGACGTCTCC
VBSYGTCTGG
 A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

CREB3L1/MA0839.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGACGTCTCC-
ATGCCACGTCATCA
 A C G T A C G T A C G T A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGACGTCTCC
--ACGTCATC
 A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C
A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGACGTCTCC
GATGACGTCATC
 A C G T A C G T A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C
T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C

CREB1/MA0018.2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGACGTCTCC
TGACGTCA--
 A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C
A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGACGTCTCC
AATGCCACGTCATC
 A C G T A C G T A C G T A C G T A T G C A T C G C T G A A G T C A T C G A G C T A G T C C G A T A T G C A G T C
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C