p-value: | 1e-9 |
log p-value: | -2.196e+01 |
Information Content per bp: | 1.819 |
Number of Target Sequences with motif | 30.0 |
Percentage of Target Sequences with motif | 3.48% |
Number of Background Sequences with motif | 406.4 |
Percentage of Background Sequences with motif | 0.86% |
Average Position of motif in Targets | 41.1 +/- 26.9bp |
Average Position of motif in Background | 51.8 +/- 35.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.04 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PAX5/MA0014.2/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCAGCAAAGC----- GAGGGCAGCCAAGCGTGAC |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGCAAAGC------ GCAGCCAAGCGTGACN |
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PB0084.1_Tcf7l2_1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCAGCAAAGC---- NNNAGATCAAAGGANNN |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGCAAAGC GGAACAAAGR |
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Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGCAAAGC ACATCAAAGG |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGCAAAGC----- SCAGYCADGCATGAC |
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TCF7L2/MA0523.1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCAGCAAAGC-- AAAGATCAAAGGAA |
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PB0082.1_Tcf3_1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCAGCAAAGC---- TATAGATCAAAGGAAAA |
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Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGCAAAGC-- ACATCAAAGGNA |
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PB0040.1_Lef1_1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCAGCAAAGC---- NANAGATCAAAGGGNNN |
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